Hi Steve,
in the Blink window (above) you see two big icons that control Blink's behavior regarding the STF stretch: the lower icon (Compute AutoSTF for the current image, then apply the computed STF to all images) is selected by default. However, when you select the upper icon (Apply an automatic histogram transformation to all images) the AutoSTF is computed for each of the images and they are then displayed accordingly. I hope this helps.
A second feature of Blink that I use often is "Series analysis report", activated by a click on the little bar chart icon at the bottom. You can initiate an output of the statistical data of all checked images as a CSV file by checking 'Write text file'. You can choose an output directory, the data range (0.0 to 1.0 or 0 to 65535) and the number of decimal places of the statistical data. CSV files can be imported in spreadsheet software like LibreOffice or OpenOffice where you can calculate with or plot these values.
Bernd