Hi Colin,
Thank you, I'm happy to hear that this tool is useful for you!
The script locates objects based on the astrometric solution and a star catalog, so unfortunately you cannot do the photometry if you don't have the astrometry.
I would like to take a look to some of your images. Could you upload some JPEG files? I guess there should be at least some stars... Try decreasing the star sensitivity of ImageSolver to the minimum value (-3) and you'll probably need to enable some noise reduction.
Could you please upload a process icon set containing the settings of the ImageSolver and AperturePhotometry scripts?
I've been capable of solving wide field images (40ยบ FOV) of only 15 seconds exposures with a 10 nm filter. In these images, you have very few stars and they are terribly noisy. So I'm pretty sure we'll find a solution for yours with the right settings.
Best regards,
Vicent.