Hi Magnus,
Sorry - 'FlatDarks' is just a name that I use to describe one of the various collections of imaging data required for any imaging session, as follows:
Biases : Taken at the shortest practical exposure time (not always needed, especially if the imager can be run at a stable, repeatable - preferably temperature-controlled - level)
Darks : Taken at the same exposure time, and temperature, as the corresponding Lights
Flats : Taken using some form of reliable, uniform, light source
FlatDarks : Darks taken at the same exposure time, and temperature, as the corresponding Flats
Lights : Taken at an exposure time to suit the conditions and requirements, and at a stable, repeatable (preferably temperature-controlled) level
So, you will need darks taken to match your lights. However, if you can control the CCD temperature, then Darks can be taken ahead of time, and a library of such darks can last for a very long time (perhaps even years).
If you can control CCD temperatures, and have Darks to match your lights, then there is no need for Biases (otherwise, Biases are required to help match the Darks to the Lights)
Given that Flats are just a specialised type of Lights, you will still need darks to calibrate these Flats - I call these FlatDarks, to differentiate between the two Darks being used. It is just a name!
The only datasets that really need to be taken at every session are Lights and Flats. However, if your setup does not change between sessions (and that includes focus) then you don't eben need to re-acquire Flats. That said, even using a filterwheel can cause the optical train to require re-focusing every time a filter is changed (that is why I stopped working with mono imagers and filterwheels, in favour of OSC imagers - the time saved is significant, and when local weather conditions are often the biggest single limiting factor in image acquisition, every second saved can be critical).
Hope this helps.