i don't know much about landscape astrophotography - obviously you have the added complication of parts of the frame moving and parts of the sky not moving; assuming you are able to align the images (which i think is likely with enough tweaking), the stack is going to have a smeared-out earth component that will have to be composited back, which will likely be easier with "some other" tool (generally discussion of other astro or non-astro image processing software is frowned upon here, but people do discuss equipment).
if you are serious about "traditional" astrophotography then the best advice i've heard time and again (and i believe) is to spend most of your budget on the mount. you're probably talking about $7k to start for a mount that's going to track and guide reliably with a "real" telescope and camera package on-board. if you're not into that then i think the smaller trackers are OK, but really only for shorter focal length. at 600mm the polar alignment error of an astrotrac or similar is probably going to show up fast, and with no guiding, there's nothing there to correct it; the end result is not necessarily star streaks, but definitely oval stars. i guess you can autoguide an astrotrac, but i think it's RA only (no dec guiding).
i have used PI for "regular" photography, mainly experimenting with noise reduction and deconvolution. i think for any astronomical purpose PI is the best software available, but it does require an investment from the new user in time and effort.
the below attached is an example of iOptron skytracker + unmodified 5d3 + thrifty fifty at f/6.3. at that FL i had no issues with tracking or oval stars even with 420s sub-exposures. getting the thing polar aligned and getting the pointing set up was a real chore - with my "real" setup i just tell it to point to something and it happens. here i was on the ground peering up thru the polar scope, then discovering that the whole thing sagged with the weight of the camera on it, then re-aligning (more difficult with the camera attached), then trying to figure out the framing and rotation angle by taking test shots, etc. etc. i used a ball-head mount to point the camera. if the camera were modified then the nebulae would stand out way more - a non-modified camera cuts the red light from the Hydrogen-alpha line by about 80%! i would not worry too much about the clip-in filters; they go in in front of the mirror so there's no chance you're going to drop something on the sensor. however with the dark skies you have you probably don't need to use any filters at all; mainly people use the clip-in filters on DSLRs for light pollution.
by parallax error do you mean distortions caused by nearby objects shifting as the camera pans?
rob