Hello
You have to calibrate your light images prior to align them.
To do this, you have to intregrate your bias frames to generate a master bias.
Then you calibrate your darks and integrate them to generate a master dark.
Then you calibrate your flats and integrate them to generate a baster flat
Finally you calibrate your ligts using the previous masters.
An option is to use the Batch Processing Script where you can add the calibration frames to each seccion (bias, dark, flats and lights) and process them all together.
Regards
Geert